Gene detail

Detailed information of evm.model.HiC_scaffold_23.425 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:5564688...5565880
NR annotation: XP_013406499.1, transcription factor Sox-7 [Lingula anatina]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P40657	Putative transcription factor SOX-15 OS=Drosophila melanogaster OX=7227 GN=Sox15 PE=2 SV=2
O42342	Transcription factor Sox-7 OS=Xenopus laevis OX=8355 GN=sox7 PE=2 SV=1
Q28GD5	Transcription factor Sox-7 OS=Xenopus tropicalis OX=8364 GN=sox7 PE=2 SV=1

Gene family	Subfamily
Transcription Factors Family	HMG

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00505	HMG_box	HMG (high mobility group) box	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009071	Domain	High mobility group box domain	Interproscan
IPR036910	Homologous_superfamily	High mobility group box domain superfamily	Interproscan
IPR050140	Family	SRY-related HMG-box transcription factors	Interproscan
IPR021934	Domain	Sox, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10270	SOX TRANSCRIPTION FACTOR	Interproscan

Gene Ontology

GO terms	Category	Description	Source
-	-	-	-

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23581	SOX4; transcription factor SOX4 (SOX group C)	-	Transcription factors	ko03000	deepkoala