Genomic Location: HiC_scaffold_23:5772954...5795829
NR annotation: XP_022107345.1, nephrocystin-3-like [Acanthaster planci]
| CDS | |||||
| evm.model.HiC_scaffold_23.443 | |||||
| Transcript |
| evm.model.HiC_scaffold_23.443 |
| Protein |
| evm.model.HiC_scaffold_23.443 |
| Uniprot term | Description |
|---|---|
| Q7TNH6 | Nephrocystin-3 OS=Mus musculus OX=10090 GN=Nphp3 PE=1 SV=2 |
| Q7Z494 | Nephrocystin-3 OS=Homo sapiens OX=9606 GN=NPHP3 PE=1 SV=1 |
| Q6AZT7 | Nephrocystin-3 OS=Xenopus laevis OX=8355 GN=nphp3 PE=2 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF13176 | TPR_7 | Tetratricopeptide repeat | Repeat | Interproscan |
| PF13424 | TPR_12 | Tetratricopeptide repeat | Repeat | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR011990 | Homologous_superfamily | Tetratricopeptide-like helical domain superfamily | Interproscan |
| IPR019734 | Repeat | Tetratricopeptide repeat | Interproscan |
| IPR027417 | Homologous_superfamily | P-loop containing nucleoside triphosphate hydrolase | Interproscan |
| IPR051787 | Family | Effector and Ciliary Development-Associated Protein | Interproscan |
| IPR025662 | Binding_site | Sigma-54 interaction domain, ATP-binding site 1 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45641 | TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870) | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0005515 | Molecular Function | protein binding | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K19360 | NPHP3; nephrocystin-3 | - | Cilium and associated proteins | ko03037 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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