Detailed information of evm.model.HiC_scaffold_23.472 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_23:6169916...6172484
NR annotation: KAI8489050.1, hypothetical protein Bbelb_332740 [Branchiostoma belcheri]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O92815Gag-Pol polyprotein OS=Walleye dermal sarcoma virus OX=39720 GN=gag-pol PE=1 SV=2
P27502Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1
O93209Pro-Pol polyprotein OS=Feline foamy virus OX=53182 GN=pol PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00589Phage_integrasePhage integrase familyFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002104DomainIntegrase, catalytic domainInterproscan
IPR013762Homologous_superfamilyIntegrase-like, catalytic domain superfamilyInterproscan
IPR052055FamilyHepadnavirus polymerase/reverse transcriptaseInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR011010Homologous_superfamilyDNA breaking-rejoining enzyme, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33050REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006310Biological ProcessDNA recombinationInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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