Gene detail

Detailed information of evm.model.HiC_scaffold_232.9 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_232:81153...83003
NR annotation: XP_015770253.1, PREDICTED: TFIIH basal transcription factor complex helicase XPD subunit-like [Acropora digitifera]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O08811	General transcription and DNA repair factor IIH helicase subunit XPD OS=Mus musculus OX=10090 GN=Ercc2 PE=1 SV=2
Q60452	General transcription and DNA repair factor IIH helicase subunit XPD OS=Cricetulus griseus OX=10029 GN=ERCC2 PE=1 SV=1
A6QLJ0	General transcription and DNA repair factor IIH helicase subunit XPD OS=Bos taurus OX=9913 GN=ERCC2 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR014013	Domain	Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type	Interproscan
IPR045028	Family	Helicase superfamily 1/2, DinG/Rad3-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11472	DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0003684	Molecular Function	damaged DNA binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006366	Biological Process	transcription by RNA polymerase II	Interproscan
GO:0045951	Biological Process	positive regulation of mitotic recombination	Interproscan