Gene detail

Detailed information of evm.model.HiC_scaffold_24.126 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:1183172...1196419
NR annotation: XP_048579599.1, spectrin beta chain, non-erythrocytic 1 [Nematostella vectensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00018	SH3_1	SH3 domain	Domain	Interproscan
PF00435	Spectrin	Spectrin repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001452	Domain	SH3 domain	Interproscan
IPR018159	Repeat	Spectrin/alpha-actinin	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR002017	Repeat	Spectrin repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11915	SPECTRIN/FILAMIN RELATED CYTOSKELETAL PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0030054	Cellular Component	cell junction	Interproscan
GO:0030864	Cellular Component	cortical actin cytoskeleton	Interproscan
GO:0042995	Cellular Component	cell projection	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan