Gene detail

Detailed information of evm.model.HiC_scaffold_24.53 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:350112...352208
NR annotation: CAG9565363.1, unnamed protein product [Danaus chrysippus]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
P35072	Transposable element Tcb1 transposase OS=Caenorhabditis briggsae OX=6238 PE=3 SV=1
P34257	Transposable element Tc3 transposase OS=Caenorhabditis elegans OX=6239 GN=tc3a PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13936	HTH_38	Helix-turn-helix domain	Domain	Interproscan
PF13358	DDE_3	DDE superfamily endonuclease	Domain	Interproscan
PF01498	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR025246	Domain	Transposase IS30-like HTH domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR038717	Domain	Tc1-like transposase, DDE domain	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR000569	Domain	HECT domain	Interproscan
IPR002492	Domain	Transposase, Tc1-like	Interproscan
IPR052338	Family	Transposase_5	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23022	TRANSPOSABLE ELEMENT-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0006313	Biological Process	DNA transposition	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan