Detailed information of evm.model.HiC_scaffold_24.83 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:647122...662634
NR annotation: XP_002162060.3, programmed cell death 6-interacting protein-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9W6C5Programmed cell death 6-interacting protein OS=Xenopus laevis OX=8355 GN=pdcd6ip PE=1 SV=1
Q9WU78Programmed cell death 6-interacting protein OS=Mus musculus OX=10090 GN=Pdcd6ip PE=1 SV=3
Q9QZA2Programmed cell death 6-interacting protein OS=Rattus norvegicus OX=10116 GN=Pdcd6ip PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13949ALIX_LYPXL_bndALIX V-shaped domain binding to HIV DomainInterproscan
PF03097BRO1BRO1-like domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025304DomainALIX V-shaped domainInterproscan
IPR045251FamilyVacuolar protein-sorting protein Bro1-likeInterproscan
IPR004328DomainBRO1 domainInterproscan
IPR038499Homologous_superfamilyBRO1 domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23030PCD6 INTERACTING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000281Biological Processmitotic cytokinesisInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0071985Biological Processmultivesicular body sorting pathwayInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12200PDCD6IP, ALIX, RIM20; programmed cell death 6-interacting protein-Exosomeko04147deepkoala

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