Gene detail

Detailed information of evm.model.HiC_scaffold_24.86 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:690230...693127
NR annotation: MCP4484998.1, hypothetical protein [Flavobacteriaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_24.86

atgattaatgacttttatcttacatgtaccaacgattcagattcagcaataaaacttaaagaacaattacatttacatggaaaatgggaagtGGCATTAgcggaaatggtctatgaactgagcgatagatttatatttaatcccgcagaattcaaatatgggaaatatgaaccctggcgaatgatgggatttttccaaattggtaccgacaaggttggttttgaagatttgaacgtgagattggtaatatctgatgaatatacaaagaaatggaatcaggcagctgataagcgggagtattatgtacgtcttagtcaccttattggtgaaatctcagagggagatgacgttcacaaattaacaatgagagaaattgtttcaattatgaatgaagacattcgcgcgcaagagggaagaataaaagaatatgtaaaagaattaggtttgccttacgaagatctgccacagttttcaattgtagattcaaaaatcaagataacctttccaaagtacgttaaaagagttgcattgggaaaagatttgtgcaaattgtttggtttcgttgaagctacagaagaatataataaaaacatgaataatgtttattacagagatgtgagatggacaccatgtccatttactggaacttttctagacaaaccattaacagattatgtattcaacgcaatcgaaagaacgactgatgtggtgggtgatgaacatttccaagtcaacgcagaagggaagaatatgtttatatattgctcgttgttagactatcgtgtagttggaaaaattagcacgccactgctacgcttcattccgttgaaaattaacaagcacgttgtaaattttgtggaatttgaaaatttgttctactatccactattatacaacgatatcaacgaatttactataaaagtctacaacgagttgggaaaagagatacaattctacaaaacaaagacaacattcttgctacactttagaagaaaacatcgtggaagaggagtaggtagtattttcaggaaagccggatctatttttaaaagagctgttaaagctgcaatgccaacaataaagaaacaaggtgtaaaagctgctgagaaaattttaaaacctgttttagaagaagaaggagagaaggctgtcgatcggatattagctggtgagaatgttggagaagttgtaaaagatactaccaaatcttctatgagaggaattaaaaggaaggctactgaagaaatcgccgatgtgGTGAAGAAATCTatcaagaaatcgcctgctggtaagaaatcgcctgctgctggtaagaaatcgcctgctgctggtaagaaatcgcctgctgctggtaagaaatcgcctgctgctgaaactgttgaagaagaatttgcaacaatgagcataaagccagaatatactgaatgtcctagtgaaagtttggatttattctgtccgccagtaattcaaaatgatgtcaagtattttaaagatgttgaatattttccacaaactgctgctctcaatgcctcaaaacaaactgttgtgtttgacattcctgctcagcctgatcatatgattgacttgaatcattcttatttcgtctcgactctggctattaaaagagtcgatggaagtaatattggaaaaaccactgcagaatttgctggagtaataaataatattggccaatccatgtggaagcagatagagctggttttgaatgacactcccgtcacagaagcaaatggaatgtatgcctaccaatcttacttggaaacaattctgacgtttgatgaaaccagagctaaaaactatttgaaaatgacaaactgggtcagtgatacgattggcaaagaaaatgttggttttccaacaaccacatcagcatcaaaaaatctgggtttaaatgcaagatctgcaccatttgacgagagtgaaaaggttaaagtgttgacaaaacctcatgttaacatttgcaatcaaagcaaatacttgctgcctggtgttcgtcttcaatggcgattgagtccaaacagtgatgtgttttgtttgatgagaaaagctggaaccacttcgcgcttatacatttccgaagtgaaactggtgcttcgtcacatacatcttaaagatgatgtattgaaaggaattgaaagaacactgatgaaaacgaatgcggtttacccagtctgtcaacctcacatggcaagctacttaatcaatgctgcaacaaccaactgggttcaagataatgtattcaacggaaagattccaaacagattgttttttgcgctggttgataattcatcattcaatggagcggatgaaggaaatccttttgagtttgaacatgtttctgtttctgccattcaagtgactgttgacaatcaagaaattaccccacctctaagattgaattatgatgatgatgattactttgatgcctacagccgcttggtgaccagcttgaataattcacctagtctaattgattatgatagattcaaacaaggatcggcaatctatgggtttgatttgacacctaaaggaaactgtgcagatgagcaatatttgcttaaaagagagggtaatctgagaatcagtataaattttgcaaacgctgttgacagtttgatgaacattgtaattttgggtgaatttgatagagtcattcaaattgatagtcataaaaacatcattcgagattggtaa

Transcript

evm.model.HiC_scaffold_24.86

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR000358	Family	Ribonucleotide reductase small subunit family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23409	RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004748	Molecular Function	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0009263	Biological Process	deoxyribonucleotide biosynthetic process	Interproscan