Gene detail

Detailed information of evm.model.HiC_scaffold_24.93 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_24:727166...731871
NR annotation: CAB4009991.1, Transposon Ty3-G Gag-Pol poly [Paramuricea clavata]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P26007	Integrin alpha-6 OS=Gallus gallus OX=9031 GN=ITGA6 PE=2 SV=1
Q61739	Integrin alpha-6 OS=Mus musculus OX=10090 GN=Itga6 PE=1 SV=3
Q63258	Integrin alpha-7 OS=Rattus norvegicus OX=10116 GN=Itga7 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20806	Integrin_A_Ig_3	Integrin alpha Ig-like domain 3	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR001584	Domain	Integrase, catalytic core	Interproscan
IPR018184	Conserved_site	Integrin alpha chain, C-terminal cytoplasmic region, conserved site	Interproscan
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR032695	Homologous_superfamily	Integrin domain superfamily	Interproscan
IPR048286	Domain	Integrin alpha, third immunoglobulin-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47266	ENDONUCLEASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0015074	Biological Process	DNA integration	Interproscan