Gene detail

Detailed information of evm.model.HiC_scaffold_243.11 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_243:84691...98559
NR annotation: CAH3177982.1, unnamed protein product [Porites lobata]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_243.11

ATGACAACAGTTGGGTACGGTGACTTTTATCCAAAATCAACGGTGGGGCGATTGCTTGCGACGATGTGGATTCTCACAGGGACTGTAATAATATCACTGTTTACAGCGTCAATTACCACCATCTTACTGGCGGCCTGTTTGGCTAATGATGTTACTATGAACAGAGCAAAGaTTTCTGTAATCAAGAGCAGTACAGAATACAGGCTTGCCATTAAAAGACATGCTGTTCCAATTGAGCAATCATCTGTTCAAGAAATGGTCGAAATGATGTCAAGCGCAACAGTTGATGGGGCCCTATTGGACAGTTTCGTTGCTGGCTATTATCAAGACAGTTTTAATAGATTTCGATTGGTGGATATCATCGAGCATGTGTTTGCATATGGCTTGGTTTTAACCCGAAAAGGATTATGGATGGAACCTCTCATTCGAGAATACACACAGAATAATAAAGACAGGCTTTTTACATACATGTCCACATCCGTCAGACCCCTAAAGTCAGACAACTACGGCAGTGCTGCAGTAGTGAAATCTAACAGTCTTCTTGACATACACAACAATGCCATGTCATCTACGCTAATTGGCATTACATCATTGATAGTACTTCTGGTTATCATTGGTAATATCTTTGACAGATGCTACCTAAGAAAGCGAAAGGGTTATAGAGATAAGAACTCTTGCAATAACATGAACCAGCCAAAAGAGCTTGTTGAATTGCAGAAGCTACACATGAAAAATAAACTTGACGctttgaaagaaataaaaactgaTATAGAAAGATTCCGTGATCTGTTAAAAGTTCAGCTTGCTTTGGCACAGAGGAAGAGTGAAAATTCGGGAATTCGCATCGGCGGGATGAAAAAATTCCGCGGCCTGCATCAGATGATGCGGAATTTTTCATCTGCGCCGTTCCGGAGGATGGCGAATCCCTTTCGCATTAGATTTTCTGCAAATTTCGCTGTCGCGCccgtaaatgctcgagaagacggcagacacctatgtcgacaagttgtagacaaaggcataggcgaaggcatagaaacaagtgtaggtgtagatgaaggcataggcgaaggcataggcataggcacaggtgtagttttagatgtaggcattggtgtaggcgaaggcatacgcacaggtgtaggtgtaggcataggcataggcgtaggcacaggaacaggcataggcaaagccataggcacaggtgtagatctaGATGTAGGCATCGGTGTACGCGAATGCATTGGCACaagcgtaggtgtagatgtaggcatcggTGTAGGCGAatgcataggcacaggcgtaggtgtagatgtaggcattggtgtaagcgaaggcataggcactgGTGTAGGTGTTGGCTTAGGCGGTTATCGTcagcggatattgctagtttggaaaagaggcttggtggtggattggaggggaattcaaatactacggttcaccctaaaaacagaaaaatccgttcactttcgtgttaaaagttgcaagatgagagacgcagttcgcaagttgttacgtcgaaaaatgtataactctGGACCATTAGGAGTCAGCGTTTCAACAGAAGCTTTAAACACATTTAATGCTTTCAGAAGAAGAGGTGAAAGTGACATTGCATTTGTCACTTATAAAATCAATGGCAAAATTCTTGAAGTGGATGAAGTGGTAAAACAAGAtcagttgaaagaaattttgtcAAGTGAAAAAACAATGAGTTCTTTCAAACAATTCCCAAACGAAGAAGATGGTTGGGCTTGCATGAGGTATTTCTTGACTAGGGATAAATCTGCAAGATTTGCTACCGTAATGtgcaaatataaaaacaaaagcgCAGAACCAAGGGAAGAACTTACATTAGTCACCTGGTTGAATGATGATGCTCCTGTCAAAGAACGCTTGTCGATATCCGTTGCGGAAGAGGATGTGTGTAAGGCTTTTGCAGGTTTAAACTTTCGTCTTGAAGCAAAGAAAGACTCAGATCTGGATTACTTTGAAGCTGCAAAGAATGCAAGCAAAGGCAGCGCTGTGTTTTAA

Transcript

evm.model.HiC_scaffold_243.11

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07885	Ion_trans_2	Ion channel	Family	Interproscan
PF00241	Cofilin_ADF	Cofilin/tropomyosin-type actin-binding protein	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052258	Family	Diverse Functionality Domain-containing Protein	Interproscan
IPR013099	Domain	Potassium channel domain	Interproscan
IPR029006	Homologous_superfamily	ADF-H/Gelsolin-like domain superfamily	Interproscan
IPR002108	Domain	Actin-depolymerising factor homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR37612	FIBROIN HEAVY CHAIN FIB-H LIKE PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003779	Molecular Function	actin binding	Interproscan