Genomic Location: HiC_scaffold_246:178672...211632
NR annotation: PFX20527.1, hypothetical protein AWC38_SpisGene15012 [Stylophora pistillata]
| CDS | ||||
| evm.model.HiC_scaffold_246.21 | ||||
| Transcript |
| evm.model.HiC_scaffold_246.21 |
| Protein |
| evm.model.HiC_scaffold_246.21 |
| Uniprot term | Description | |||
|---|---|---|---|---|
| Q2TBG8 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Bos taurus OX=9913 GN=UCHL3 PE=2 SV=1 | |||
| P15374 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Homo sapiens OX=9606 GN=UCHL3 PE=1 SV=1 | |||
| Q9JKB1 | Ubiquitin carboxyl-terminal hydrolase isozyme L3 OS=Mus musculus OX=10090 GN=Uchl3 PE=1 SV=2 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|UCH|UCH |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF05380 | Peptidase_A17 | Pao retrotransposon peptidase | Family | Interproscan |
| PF00078 | RVT_1 | Reverse transcriptase (RNA-dependent DNA polymerase) | Domain | Interproscan |
| PF17921 | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF05585 | DUF1758 | Putative peptidase (DUF1758) | Family | Interproscan |
| PF01088 | Peptidase_C12 | Ubiquitin carboxyl-terminal hydrolase, family 1 | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001578 | Domain | Peptidase C12, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR000477 | Domain | Reverse transcriptase domain | Interproscan |
| IPR008042 | Family | Retrotransposon, Pao | Interproscan |
| IPR036397 | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR012337 | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR043128 | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR043502 | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR041588 | Domain | Integrase zinc-binding domain | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| IPR008737 | Domain | Peptidase aspartic, putative | Interproscan |
| IPR036959 | Homologous_superfamily | Peptidase C12, ubiquitin carboxyl-terminal hydrolase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR22955 | RETROTRANSPOSON | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0006511 | Biological Process | ubiquitin-dependent protein catabolic process | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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