Detailed information of evm.model.HiC_scaffold_25.156 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_25:2323613...2378457
NR annotation: CAH3120661.1, unnamed protein product [Pocillopora meandrina]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6RI45Bromodomain and WD repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=BRWD3 PE=1 SV=2
A2AHJ4Bromodomain and WD repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Brwd3 PE=1 SV=1
Q8WWQ0PH-interacting protein OS=Homo sapiens OX=9606 GN=PHIP PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00439BromodomainBromodomainDomainInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR001487DomainBromodomainInterproscan
IPR036427Homologous_superfamilyBromodomain-like superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR052060FamilyBromodomain and WD repeat-containingInterproscan
IPR018359Conserved_siteBromodomain, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16266WD REPEAT DOMAIN 9Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007010Biological Processcytoskeleton organizationInterproscan
GO:0008360Biological Processregulation of cell shapeInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11798BRWD1_3; bromodomain and WD repeat domain containing protein 1/3-Ubiquitin systemko04121deepkoala

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