Detailed information of evm.model.HiC_scaffold_25.204 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_25:2967618...2984742
NR annotation: AAC63362.1, head-activator binding protein precursor [Hydra viridissima]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q98930Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1
O88307Sortilin-related receptor OS=Mus musculus OX=10090 GN=Sorl1 PE=1 SV=3
P0DSP1Sortilin-related receptor OS=Rattus norvegicus OX=10116 GN=Sorl1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan
PF15902Sortilin-Vps10Sortilin, neurotensin receptor 3,RepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR006581DomainVPS10Interproscan
IPR050310FamilyVPS10-related sortilin family receptorsInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR031778DomainSortilin, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12106SORTILIN RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005794Cellular ComponentGolgi apparatusInterproscan
GO:0006892Biological Processpost-Golgi vesicle-mediated transportInterproscan
GO:0016021Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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