Detailed information of evm.model.HiC_scaffold_254.50 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_254:638264...659911
NR annotation: XP_020627371.1, DNA polymerase zeta catalytic subunit-like isoform X1 [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q61493DNA polymerase zeta catalytic subunit OS=Mus musculus OX=10090 GN=Rev3l PE=1 SV=3
O60673DNA polymerase zeta catalytic subunit OS=Homo sapiens OX=9606 GN=REV3L PE=1 SV=2
Q9GSR1DNA polymerase zeta catalytic subunit OS=Drosophila melanogaster OX=7227 GN=PolZ1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14260zf-C4polC4-type zinc-finger of DNA polymerase deltaDomainInterproscan
PF03104DNA_pol_B_exo1DNA polymerase family B, exonuclease domainFamilyInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00136DNA_pol_BDNA polymerase family BFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR006172FamilyDNA-directed DNA polymerase, family BInterproscan
IPR025687DomainC4-type zinc-finger of DNA polymerase deltaInterproscan
IPR030559FamilyDNA polymerase zeta catalytic subunitInterproscan
IPR006133DomainDNA-directed DNA polymerase, family B, exonuclease domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR023211Homologous_superfamilyDNA polymerase, palm domain superfamilyInterproscan
IPR017964Conserved_siteDNA-directed DNA polymerase, family B, conserved siteInterproscan
IPR006134DomainDNA-directed DNA polymerase, family B, multifunctional domainInterproscan
IPR042087Homologous_superfamilyDNA polymerase family B, thumb domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45812DNA POLYMERASE ZETA CATALYTIC SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003887Molecular FunctionDNA-directed DNA polymerase activityInterproscan
GO:0000724Biological Processdouble-strand break repair via homologous recombinationInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0016035Cellular Componentzeta DNA polymerase complexInterproscan
GO:0019985Biological Processtranslesion synthesisInterproscan
GO:0042276Biological Processerror-prone translesion synthesisInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K02350REV3L, POLZ; DNA polymerase zetaEC:2.7.7.7
DNA repair and recombination proteinsko03400deepkoala

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