Detailed information of evm.model.HiC_scaffold_255.8 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_255:111514...123243
NR annotation: XP_022779494.1, E3 ubiquitin-protein ligase TRAF7-like [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q4PJX1Protein odr-4 homolog OS=Mus musculus OX=10090 GN=Odr4 PE=1 SV=2
A3KNB6Protein odr-4 homolog OS=Xenopus laevis OX=8355 GN=odr4 PE=2 SV=1
Q54QH3Protein odr-4 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0283829 PE=3 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00400WD40WD domain, G-beta repeatRepeatInterproscan
PF02176zf-TRAFTRAF-type zinc fingerFamilyInterproscan
PF14778ODR4-likeOdorant response abnormal 4-likeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013010DomainZinc finger, SIAH-typeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR001293DomainZinc finger, TRAF-typeInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR019775Conserved_siteWD40 repeat, conserved siteInterproscan
IPR029454FamilyODR-4-likeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR33966PROTEIN ODR-4 HOMOLOGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008104Biological Processprotein localizationInterproscan
GO:0012505Cellular Componentendomembrane systemInterproscan

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