Detailed information of evm.model.HiC_scaffold_257.25 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_257:283094...315872
NR annotation: CAH1273053.1, GCAT [Branchiostoma lanceolatum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O889862-amino-3-ketobutyrate coenzyme A ligase, mitochondrial OS=Mus musculus OX=10090 GN=Gcat PE=1 SV=2
Q0P5L82-amino-3-ketobutyrate coenzyme A ligase, mitochondrial OS=Bos taurus OX=9913 GN=GCAT PE=1 SV=1
O756002-amino-3-ketobutyrate coenzyme A ligase, mitochondrial OS=Homo sapiens OX=9606 GN=GCAT PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03381CDC50LEM3 (ligand-effect modulator 3) family / CDC50 familyFamilyInterproscan
PF00155Aminotran_1_2Aminotransferase class I and IIDomainInterproscan
PF19055ABC2_membrane_7ABC-2 type transporterFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005045FamilyCDC50/LEM3 familyInterproscan
IPR015421Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR004839DomainAminotransferase, class I/classIIInterproscan
IPR001917Binding_siteAminotransferase, class-II, pyridoxal-phosphate binding siteInterproscan
IPR043926DomainABC transporter family G domainInterproscan
IPR015422Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR050087Family8-amino-7-oxononanoate synthase class-IIInterproscan
IPR015424Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13693CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016020Cellular ComponentmembraneInterproscan
GO:0009058Biological Processbiosynthetic processInterproscan
GO:0030170Molecular Functionpyridoxal phosphate bindingInterproscan
GO:0016740Molecular Functiontransferase activityInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan

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