Detailed information of evm.model.HiC_scaffold_257.5 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_257:77342...93097
NR annotation: XP_028414307.1, uncharacterized protein LOC114537471 [Dendronephthya gigantea]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A7SFP1Leucine-rich repeat protein soc-2 homolog OS=Nematostella vectensis OX=45351 GN=v1g189306 PE=3 SV=1
Q8AVI4Leucine-rich repeat protein SHOC-2 OS=Xenopus laevis OX=8355 GN=shoc2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13855LRR_8Leucine rich repeatRepeatInterproscan
PF18758KDZKyakuja-Dileera-Zisupton transposaseFamilyInterproscan
PF18802CxC1CxC1 like cysteine cluster associated with KDZ transposasesDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003591RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR050216FamilyLeucine-rich repeat domain-containing proteinInterproscan
IPR001611RepeatLeucine-rich repeatInterproscan
IPR040521FamilyKyakuja-Dileera-Zisupton transposaseInterproscan
IPR041320DomainCxC1-like cysteine cluster associated with KDZ transposasesInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48051-Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan

TOP