Genomic Location: HiC_scaffold_258:48858...67563
NR annotation: XP_047134459.1, ubiquitin carboxyl-terminal hydrolase 20-like isoform X1 [Hydra vulgaris]
| CDS | |||||
| evm.model.HiC_scaffold_258.6 | |||||
| Transcript |
| evm.model.HiC_scaffold_258.6 |
| Protein |
| evm.model.HiC_scaffold_258.6 |
| Uniprot term | Description | ||||
|---|---|---|---|---|---|
| A0JM59 | Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus tropicalis OX=8364 GN=usp20 PE=2 SV=1 | ||||
| Q28CN3 | Ubiquitin carboxyl-terminal hydrolase 33 OS=Xenopus tropicalis OX=8364 GN=usp33 PE=2 SV=2 | ||||
| A5PMR2 | Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio OX=7955 GN=usp33 PE=2 SV=1 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DUB|USP|USP |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF02148 | zf-UBP | Zn-finger in ubiquitin-hydrolases and other protein | Domain | Interproscan |
| PF00443 | UCH | Ubiquitin carboxyl-terminal hydrolase | Family | Interproscan |
| PF06337 | DUSP | DUSP domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR006615 | Domain | Peptidase C19, ubiquitin-specific peptidase, DUSP domain | Interproscan |
| IPR035927 | Homologous_superfamily | DUSP-like superfamily | Interproscan |
| IPR028889 | Domain | Ubiquitin specific protease domain | Interproscan |
| IPR001607 | Domain | Zinc finger, UBP-type | Interproscan |
| IPR050185 | Family | Ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR013083 | Homologous_superfamily | Zinc finger, RING/FYVE/PHD-type | Interproscan |
| IPR001394 | Domain | Peptidase C19, ubiquitin carboxyl-terminal hydrolase | Interproscan |
| IPR018200 | Conserved_site | Ubiquitin specific protease, conserved site | Interproscan |
| IPR038765 | Homologous_superfamily | Papain-like cysteine peptidase superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR21646 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004843 | Molecular Function | cysteine-type deubiquitinase activity | Interproscan |
| GO:0008270 | Molecular Function | zinc ion binding | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0016579 | Biological Process | protein deubiquitination | Interproscan |
| KO | Enzyme | Enzyme ID | pathway | mapID | Source |
|---|---|---|---|---|---|
| K11848 | USP20_33; ubiquitin carboxyl-terminal hydrolase 20/33 | EC:3.4.19.12 | Ubiquitin system | ko04121 | deepkoala |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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