Detailed information of evm.model.HiC_scaffold_26.522 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:5440410...5457472
NR annotation: XP_047122671.1, SLIT-ROBO Rho GTPase-activating protein 3-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
O43295SLIT-ROBO Rho GTPase-activating protein 3 OS=Homo sapiens OX=9606 GN=SRGAP3 PE=1 SV=3
Q812A2SLIT-ROBO Rho GTPase-activating protein 3 OS=Mus musculus OX=10090 GN=Srgap3 PE=1 SV=1
Q7Z6B7SLIT-ROBO Rho GTPase-activating protein 1 OS=Homo sapiens OX=9606 GN=SRGAP1 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00611FCHFes/CIP4, and EFC/F-BAR homology domainFamilyInterproscan
PF14604SH3_9Variant SH3 domainDomainInterproscan
PF00620RhoGAPRhoGAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR051627FamilySLIT-ROBO Rho GTPase-activatingInterproscan
IPR001452DomainSH3 domainInterproscan
IPR027267Homologous_superfamilyAH/BAR domain superfamilyInterproscan
IPR000198DomainRho GTPase-activating protein domainInterproscan
IPR001060DomainFCH domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR008936Homologous_superfamilyRho GTPase activation proteinInterproscan
IPR031160DomainF-BAR domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14166SLIT-ROBO RHO GTPASE ACTIVATING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030336Biological Processnegative regulation of cell migrationInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0007165Biological Processsignal transductionInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K07526SRGAP; SLIT-ROBO Rho GTPase activating protein-Membrane traffickingko04131deepkoala

TOP