Detailed information of evm.model.HiC_scaffold_26.603 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:6547607...6612108
NR annotation: XP_047122832.1, E3 ubiquitin-protein ligase HUWE1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P51593E3 ubiquitin-protein ligase HUWE1 OS=Rattus norvegicus OX=10116 GN=Huwe1 PE=1 SV=3
Q7TMY8E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus OX=10090 GN=Huwe1 PE=1 SV=5
Q7Z6Z7E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens OX=9606 GN=HUWE1 PE=1 SV=3
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity|HECT
Ubiquitin FamilyUBD|Alpha-Helix|UBA
Ubiquitin FamilyUBD|Alpha-Helix|UBM

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14377UBMUbiquitin binding regionMotifInterproscan
PF01344Kelch_1Kelch motifRepeatInterproscan
PF02825WWEWWE domainFamilyInterproscan
PF06025DUF913Domain of Unknown Function (DUF913)FamilyInterproscan
PF06588Muskelin_NMuskelin N-terminusFamilyInterproscan
PF06012DUF908Domain of Unknown Function (DUF908)FamilyInterproscan
PF00627UBAUBA/TS-N domainDomainInterproscan
PF00632HECTHECT-domain (ubiquitin-transferase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR052456FamilyCTLH complex component proteinInterproscan
IPR025527Conserved_siteHUWE1/REV1, ubiquitin-binding motifInterproscan
IPR006652RepeatKelch repeat type 1Interproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR000569DomainHECT domainInterproscan
IPR004170DomainWWE domainInterproscan
IPR037197Homologous_superfamilyWWE domain superfamilyInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR015940DomainUbiquitin-associated domainInterproscan
IPR006594Conserved_siteLIS1 homology motifInterproscan
IPR015915Homologous_superfamilyKelch-type beta propellerInterproscan
IPR010314DomainE3 ubiquitin ligase, domain of unknown function DUF913Interproscan
IPR009060Homologous_superfamilyUBA-like superfamilyInterproscan
IPR035983Homologous_superfamilyHECT, E3 ligase catalytic domainInterproscan
IPR010565DomainMuskelin, N-terminalInterproscan
IPR010309DomainE3 ubiquitin ligase, domain of unknown function DUF908Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15526MUSKELINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan

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