Genomic Location: HiC_scaffold_26:7336402...7349958
NR annotation: CAH3141581.1, unnamed protein product [Porites lobata]
| CDS | ||||
| evm.model.HiC_scaffold_26.693 | ||||
| Transcript |
| evm.model.HiC_scaffold_26.693 |
| Protein |
| evm.model.HiC_scaffold_26.693 |
| Uniprot term | Description |
|---|---|
| A4IGK4 | RNA-binding protein 5 OS=Xenopus tropicalis OX=8364 GN=rbm5 PE=2 SV=1 |
| Q6DDU9 | RNA-binding protein 5-B OS=Xenopus laevis OX=8355 GN=rbm5-b PE=2 SV=1 |
| P52756 | RNA-binding protein 5 OS=Homo sapiens OX=9606 GN=RBM5 PE=1 SV=2 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17780 | OCRE | OCRE domain | Domain | Interproscan |
| PF00076 | RRM_1 | RNA recognition motif | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR041591 | Domain | OCRE domain | Interproscan |
| IPR000504 | Domain | RNA recognition motif domain | Interproscan |
| IPR012677 | Homologous_superfamily | Nucleotide-binding alpha-beta plait domain superfamily | Interproscan |
| IPR035979 | Homologous_superfamily | RNA-binding domain superfamily | Interproscan |
| IPR036443 | Homologous_superfamily | Zinc finger, RanBP2-type superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR13948 | RNA-BINDING PROTEIN | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0003723 | Molecular Function | RNA binding | Interproscan |
| GO:0000398 | Biological Process | mRNA splicing, via spliceosome | Interproscan |
| GO:0005634 | Cellular Component | nucleus | Interproscan |
| GO:0003676 | Molecular Function | nucleic acid binding | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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