Gene detail

Detailed information of evm.model.HiC_scaffold_26.707 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:7454636...7463345
NR annotation: XP_027041348.1, uncharacterized protein LOC113669498 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_26.707

ATGCTGTCTCTACTAATAGAGAAGGATGACAAAAAGATACTGTCTGCAGAAGTAACGTTAGATGAAGCTGTTTCAAATGCCAATATAAGAGAAGAGGAGAATGCTGTCTCTACTAATACAGAAGAAGATGCCAGTGAGATACTCTCTGTTGATCTGCCCAAGGCTACCTTTGAAAATCGTTACAAGATGAAAGACTTTGAAGTTGGACCAGAAGGGTTCGTTCAGGTTTTGGTATCAAATGTTAAAGATCCGAGTCTATTTTATGTTCATTTGATAACCCCAGACgtagcaatgtttgatgagatGTTGGAAGAACTTAATGATTTCTATACAAAGAATGATTTACCCATGTCAAAGACTCGTTTGGACATTGGTGATGCAGTCATCACTAAATTCTCTGAAGATGGCAAATGGTATCGTGGTGTTATCAAACATCTCAAAATACCAGaaagtttgaaaagaaaaagtgaaTCTTGCGTAGGGGAGGATGAAGATTTTGTCTACGAAGTTCTGCATGTTGATTTTGGCAGCTCGGAATGGGTGAATATCTTTGAAGTGAGGCCAGTGGTTGAAAAGTTCTTTGATCTGCCCATGGAAACACTTCCCTGTAGCTTAGCCGACATTGCGCCAATGgAAACATCTCGAGATGTCGGGTCTGCATCTTCCACAAGCAGTAGCTCAGATAAtgaacagaagaaaaatttctttcaagctGAAATCAAACTCAAAAAAGCAATCATCATCGGTAAAAAAGGTATCTTCGATGACGCCGTCCCACTCGCTGCAGGCGACGAAGATTATAATGACGTATTCGATGAAAGCAACCGCGCGCGGTCAGAAAAACACCGTCCTAAGTGGTCAAATTCAGCTACTAGAAGACTCAAAGAGTTGACACTTGATGGAAAGCCTCGAGTTGCGAGTCTTAAAGATGGGTCTAGATACTCCAAATTACCCGATGAACCATGGCAGGTCTATCTGTATAACACGAATGAAGACGTGGAGATAATAATTAATTACGCTCTGGTTGATGAGTCCTTGGCTGTATCGAACGTTTACACGAAAGCGACTGAGCGGGCAGAAAAACCAACACAACAAGAAATCAGAAAGGTGGTAGTCAGAGAGGAAGAGCTTGAAGATATGATTGCAAATGGATTCACAAAGGCAATGAAACATCTGCGAGACGGACGAACATCTCCTGAACCGTCTGGCCTACAAACAAGCCCTACAAGTCCAACAGGCAATTTAATGGATAAATGGAACCCAATGAATGAAGACTTCTTATCACAGAGAAATGCCTATACTATTGATACTGATGACCCTGCTGTGGCCACTATGAATATTTCTGAGCCTAAAAGGGACATTTgtaaatatttcttgtctcGACGAGGATGCTTCAGAGGAAATGCTTGCACAAGAGAACATTCCAGACCTGgTGATATTTCTGATTCGAAATTGGATGCATTTTGTGTAAAAGATCAGCGTCCTATAGACAATCTTCAAATCGGAAGATTCGTCCTCATTCAAGTCACATCTATTATGACACCAGTACACTTCTTCCTCAGATTTCCTTTTGGACCAAGACCTCTGGAAGATATTCTTGGTAGAGgtcattttgttgaaaaattcgaTGATACTGATGAACTATACGAGTTacagcaaataatgaatGAAAAATATTCAAGAATGGTCTTTCGTAATTCTGATTTAACGCCGTTTGAAAAAGGAGAACTCATCGCAGCTAAATTCTCAGACGATGGTCAGTGGTATAGATGCCAGGTGAATGCAGACCTTGGAGACAAATACGAGGTCTGCTTTGTTGATTATGGAAATACTGAAACTGTCGACGAGAAAGACACCAGAAAATTGCTTCCAGAATTCCTTCATTTGGATATCCAAAGCGTCGAAGCCTTTCTTTCAAATGTAGAAATGAAAGCCTCTGTTTCTTGTGACACAAATTTGTCCAAAGCTGCAATGGACTGCTTCAAGGATTGCCTTGGCGATGAAAATATTGTCATTGCAAGAGTTATGTCGAAGGCAATCAATGGTACACTGTATTTGGAGCTTTATGACAAATATACCAATGCaaacatcaacagtattttgcTAAAGACACAGTATTTTCAAGAGATTGAAAACCCTTTATCAAAACCATGGGACATGTCAAAAGCTATTGCAGTCAATACCTCCATAGTGCACATGATACCTGGATAA

Transcript

evm.model.HiC_scaffold_26.707

Protein

Uniprot

Uniprot term	Description
P25823	Protein tudor OS=Drosophila melanogaster OX=7227 GN=tud PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00567	TUDOR	Tudor domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000571	Domain	Zinc finger, CCCH-type	Interproscan
IPR002999	Domain	Tudor domain	Interproscan
IPR050621	Family	Tudor domain-containing	Interproscan
IPR035437	Homologous_superfamily	SNase-like, OB-fold superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22948	TUDOR DOMAIN CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046872	Molecular Function	metal ion binding	Interproscan