Detailed information of evm.model.HiC_scaffold_26.789 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:8424058...8458482
NR annotation: MAG85790.1, hypothetical protein [Flavobacteriaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q9DBB5Eukaryotic translation initiation factor 4E type 3 OS=Mus musculus OX=10090 GN=Eif4e3 PE=1 SV=1
Q8N5X7Eukaryotic translation initiation factor 4E type 3 OS=Homo sapiens OX=9606 GN=EIF4E3 PE=1 SV=4
Q6NU27Eukaryotic translation initiation factor 4E type 3-B OS=Xenopus laevis OX=8355 GN=eif4e3-b PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|ZnF|NZF

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17219YAF2_RYBPYaf2/RYBP C-terminal binding motifMotifInterproscan
PF01652IF4EEukaryotic initiation factor 4EDomainInterproscan
PF05404TRAP-deltaTranslocon-associated protein, delta subunit precursor (TRAP-delta)FamilyInterproscan
PF00641zf-RanBPZn-finger in Ran binding protein and othersDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR033774Conserved_siteYaf2/RYBP C-terminal binding motifInterproscan
IPR001040FamilyTranslation Initiation factor eIF- 4eInterproscan
IPR008855FamilyTranslocon-associatedInterproscan
IPR036443Homologous_superfamilyZinc finger, RanBP2-type superfamilyInterproscan
IPR001876DomainZinc finger, RanBP2-typeInterproscan
IPR023398Homologous_superfamilyTranslation Initiation factor eIF- 4e-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46704CXC DOMAIN-CONTAINING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003743Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413Biological Processtranslational initiationInterproscan
GO:0005783Cellular Componentendoplasmic reticulumInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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