Detailed information of evm.model.HiC_scaffold_26.798 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:8537715...8542674
NR annotation: XP_043919403.1, CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4-like [Protopterus annectens]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35710Nocturnin OS=Mus musculus OX=10090 GN=Noct PE=1 SV=3
Q9ET55Nocturnin OS=Rattus norvegicus OX=10116 GN=Noct PE=2 SV=2
Q9UK39Nocturnin OS=Homo sapiens OX=9606 GN=NOCT PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR050410FamilyCCR4/nocturin mRNA turnover and transcriptionInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12121CARBON CATABOLITE REPRESSOR PROTEIN 4Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0000289Biological Processnuclear-transcribed mRNA poly(A) tail shorteningInterproscan
GO:0004535Molecular Functionpoly(A)-specific ribonuclease activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0030014Cellular ComponentCCR4-NOT complexInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12603CNOT6, CCR4; CCR4-NOT transcription complex subunit 6EC:3.1.13.4
Messenger RNA biogenesisko03019deepkoala

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