Detailed information of evm.model.HiC_scaffold_26.852 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_26:9513038...9521246
NR annotation: XP_041048002.1, succinyl-CoA ligase [GDP-forming] subunit beta, mitochondrial isoform X3 [Carcharodon carcharias]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3MHX5Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Bos taurus OX=9913 GN=SUCLG2 PE=2 SV=1
P53590Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial (Fragment) OS=Sus scrofa OX=9823 GN=SUCLG2 PE=1 SV=2
Q9Z2I8Succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial OS=Mus musculus OX=10090 GN=Suclg2 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08442ATP-grasp_2ATP-grasp domainDomainInterproscan
PF00549Ligase_CoACoA-ligaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005809FamilySuccinate--CoA ligase-like, beta subunitInterproscan
IPR016102Homologous_superfamilySuccinyl-CoA synthetase-likeInterproscan
IPR013815Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR013650DomainATP-grasp fold, succinyl-CoA synthetase-typeInterproscan
IPR005811DomainATP-citrate synthase/succinyl-CoA ligase, C-terminal domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11815SUCCINYL-COA SYNTHETASE BETA CHAINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006099Biological Processtricarboxylic acid cycleInterproscan
GO:0004776Molecular Functionsuccinate-CoA ligase (GDP-forming) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006104Biological Processsuccinyl-CoA metabolic processInterproscan
GO:0042709Cellular Componentsuccinate-CoA ligase complexInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K01900LSC2; succinyl-CoA synthetase beta subunitEC:6.2.1.4
EC:6.2.1.5
Exosomeko04147deepkoala

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