Gene detail

Detailed information of evm.model.HiC_scaffold_262.13 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_262:113031...123468
NR annotation: XP_027053567.1, uncharacterized protein LOC113680728 [Pocillopora damicornis]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_262.13

ATGGAAGGTTTTGAGTACTACCGTGGAGGCAGGTTTTTTGCAATTACAAGCACAAAACAGCAGAAATCAGAAGATGACTTTGGGTATATACACGATAAGAAACAGATAGCAGAAGATGAGATAAGTGAGAGGTTTATTGATGATCAAAATGAACAACCATATTTTGTTGAACAACAAGAACTTGTCGAAAACGGTGttcatgatgacgatgacattGTTTACAATGACAACGAATGGCCAACGCCTCCTGATCAAGATCACGATGAAGATCAAGACCGAAATCAACCACAACCGAAAATATCATCAGCTAAATCCGACCCAGTTTTATACACCTCTTTTCTTACAATCGACCATGTGAGTTCAAAAGATAAACACAGGGCGTCATTGCTGAATCTTGTTACTGGAGATCGTGAACCAGTAGTTATTGGAGCTGGACATGAAAGTTTTGACCAGGAAGATTTAGATAAAATCAAACATGATCTAGAAATGATTTCAAAGTACTTACATGATATGCCATTGGCAGCTTCATTATGGCCACAGAACTACGATGTCCTTAGAGATCTGGTCAAATTGTACTTGGCTGCTAAAAATAGCAATCCTGCATTTCTGAAGTATCTTCTTGATTATTTCTTGAAACTTGATTGGCCAGGCATCTACCTGAAATGCATGAGGAAAATCATGAATAATTATCCACAAGTTTTCCTTCATTCTTCAGACAGAAAGGTGCCATTTGAGGACCCAACTCCTGAAACGTTGGACATGACACAAGTCAGTATTGAGTATGCTGTTGCTGTAATTTTTCAAGTCATGCTGTCATTGGCTGCAGAATTCACTGAAGTCCACaaagaaagtaaaagaaatGGCAACAAAGGATTCATTCAGTTCATCTTTTTTGAGCTTCTACCAAAACTTCATGGAATCCAGTGGGGGAAGAACACTGCAAGAGAAGAGTTCTTGCTATCAACAATTGACATAGTTTACAATTTTGCTGAATCATCAGTCAATATTTCATGTTTCTATGAATGCAATGCTGTTGAAACTTTGTTGAAGCTgagaaaagaaacagaaaatattGGTGGAAACAGAGTGAATACTGGGTCTTTATTGgctctttcttttcttatcgATGAAAGAAATAATCATCTGATTATTGACGATCCAGCCCAGATAAGTTTGCTGATTCACTACATCGATGAAAGCTTATCAAAAATTGATCATTGTTTTGCTGATTTTAATATTACTGAACTAATCGAAGGATTGACCCGAATTTCATCACACAACAGAAACAAATTAATGATTTGCAAATATGGCGGTATCTCTACGATGTTAAGAGTTTTGAAAAAAgctaacgatgatgatgaaagaaTCGCAGTTTGCAATCTTCTATGGAGTTTATGTTTTGTTCCAAAATGCAAACATAAAATTATCAACCAATCACCGGAATTACTGAACACCATTCGTAAATTCAAGGGTTCGATGAATGTTTCTCTAAAAAGGGTAGCTGATTTTCTTTTCTGGGAATTGGAGGAAAAATACGAAGATCACGGGTTGCATTCAGATACAGAAATCCAGCACGTTTTACTTAGTTACCACCCTGAACAAAGGGAAATAATGTCAAAGATCAGTGAGAGTCTGAAAGAAAAAGGTTACAAAGTTCGTACAGTGCAGGATGATGCCATATCGATGCCACAGGATGTTGCAGAGGCAGTGGATAATGCAGCGACGGTTTTGATTGGCTTATCTAGAAAATACAAACAAACACCATCATGCTTTGCAGaGGCCGACTACGCATTTGAGCTGAGCAAGCATATGATACCATTATGTTTGGAACGAAATTACAAAGCTGATGGATGGCTGGGAATGTTGGCTGGTAGCAAAGTTTGGTTGGATTTCAGCGATGATAGAAAATTCACTGGACATATTGAGTTGTTGTTACGACAACTAGGAGATCGTGGAAAATCAGAAAGAGCTGTTAATATATTGTTTATTAATGATCATCAGATCGATGGCAAACTGATTGATATTTCCAGATGGGGAAATGAAGAAGTCTTGGAATGGCTGcaaaagaacaatttgaaaacATGCGTCGCGGATGAACAGTTAAAGAAACTAAGAGGCTCTCATTTAATTCGATTGCATCAGCTACGAAAAGAGAGTCCAGACTTTTATTATAACTCGCTGGAGCCACAGCTAGGATTTACTGATGTGATTGACATGATGGAATTCACTCAAGCACTTGAAGCACTGACTGAGCGTGACTAA

Transcript

evm.model.HiC_scaffold_262.13

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13676	TIR_2	TIR domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035897	Homologous_superfamily	Toll/interleukin-1 receptor homology (TIR) domain superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR000157	Domain	Toll/interleukin-1 receptor homology (TIR) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46270	ARMADILLO-TYPE FOLD-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan