Detailed information of evm.model.HiC_scaffold_265.9 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_265:121998...134386
NR annotation: XP_012563625.1, heterogeneous nuclear ribonucleoprotein L isoform X4 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P14866Heterogeneous nuclear ribonucleoprotein L OS=Homo sapiens OX=9606 GN=HNRNPL PE=1 SV=2
Q8R081Heterogeneous nuclear ribonucleoprotein L OS=Mus musculus OX=10090 GN=Hnrnpl PE=1 SV=2
F1LQ48Heterogeneous nuclear ribonucleoprotein L OS=Rattus norvegicus OX=10116 GN=Hnrnpl PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13893RRM_5RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15592MATRIN 3/NUCLEAR PROTEIN 220-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003729Molecular FunctionmRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0043484Biological Processregulation of RNA splicingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K13218PTBP1, PTB; polypyrimidine tract-binding protein 1-Spliceosomeko03041deepkoala

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