Detailed information of evm.model.HiC_scaffold_266.15 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_266:133561...146986
NR annotation: XP_026082631.1, phenylalanine--tRNA ligase beta subunit-like [Carassius auratus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9WUA2Phenylalanine--tRNA ligase beta subunit OS=Mus musculus OX=10090 GN=Farsb PE=1 SV=2
Q5R7F7Phenylalanine--tRNA ligase beta subunit OS=Pongo abelii OX=9601 GN=FARSB PE=2 SV=1
Q9NSD9Phenylalanine--tRNA ligase beta subunit OS=Homo sapiens OX=9606 GN=FARSB PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03483B3_4B3/4 domainDomainInterproscan
PF18262PhetRS_B1Phe-tRNA synthetase beta subunit B1 domainDomainInterproscan
PF17759tRNA_synthFbetaPhenylalanyl tRNA synthetase beta chain CLM domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR005146DomainB3/B4 tRNA-binding domainInterproscan
IPR045864Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR040659DomainPhenylalanine--tRNA ligase beta subunit, B1 domainInterproscan
IPR009061Homologous_superfamilyPutative DNA-binding domain superfamilyInterproscan
IPR020825Homologous_superfamilyPhenylalanyl-tRNA synthetase-like, B3/B4Interproscan
IPR045060FamilyPhenylalanine-tRNA ligase, class IIc, beta subunitInterproscan
IPR041616DomainPhenylalanyl tRNA synthetase beta chain, core domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10947PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004826Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0006432Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0009328Cellular Componentphenylalanine-tRNA ligase complexInterproscan

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