Detailed information of evm.model.HiC_scaffold_27.105 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:1451187...1460830
NR annotation: XP_048589334.1, WD repeat-containing protein 19 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8NEZ3WD repeat-containing protein 19 OS=Homo sapiens OX=9606 GN=WDR19 PE=1 SV=2
Q3UGF1WD repeat-containing protein 19 OS=Mus musculus OX=10090 GN=Wdr19 PE=1 SV=1
G5ECZ4WD repeat-containing protein dyf-2 OS=Caenorhabditis elegans OX=6239 GN=dyf-2 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF15911WD40_3WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680RepeatWD40 repeatInterproscan
IPR039468RepeatWDR19, WD40 repeatInterproscan
IPR011044Homologous_superfamilyQuinoprotein amine dehydrogenase, beta chain-likeInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR040379FamilyWD repeat-containing protein 19/dyf-2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14920OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005929Cellular ComponentciliumInterproscan
GO:0030991Cellular Componentintraciliary transport particle AInterproscan
GO:0035721Biological Processintraciliary retrograde transportInterproscan
GO:0060271Biological Processcilium assemblyInterproscan

TOP