Detailed information of evm.model.HiC_scaffold_27.201 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:2763246...2813199
NR annotation: XP_001634432.2, transforming growth factor-beta receptor-associated protein 1 [Nematostella vectensis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A4IG72Transforming growth factor-beta receptor-associated protein 1 homolog OS=Danio rerio OX=7955 GN=tgfbrap1 PE=2 SV=1
A7MB11Transforming growth factor-beta receptor-associated protein 1 OS=Bos taurus OX=9913 GN=TGFBRAP1 PE=2 SV=1
Q3UR70Transforming growth factor-beta receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tgfbrap1 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF10366Vps39_1Vacuolar sorting protein 39 domain 1RepeatInterproscan
PF08170POPLDPOPLD (NUC188) domainDomainInterproscan
PF00028CadherinCadherin domainDomainInterproscan
PF06978POP1_NRibonucleases P/MRP protein subunit POP1, N-terminalDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR019452DomainVacuolar sorting protein 39/Transforming growth factor beta receptor-associated domain 1Interproscan
IPR015919Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR020894Conserved_siteCadherin conserved siteInterproscan
IPR002126DomainCadherin-likeInterproscan
IPR012590DomainPOPLD domainInterproscan
IPR001180DomainCitron homology (CNH) domainInterproscan
IPR039182FamilyRibonucleases P/MRP protein subunit Pop1Interproscan
IPR009723DomainPop1, N-terminalInterproscan
IPR000547RepeatClathrin, heavy chain/VPS, 7-fold repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22731RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007155Biological Processcell adhesionInterproscan
GO:0007156Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0000172Cellular Componentribonuclease MRP complexInterproscan
GO:0001682Biological ProcesstRNA 5'-leader removalInterproscan
GO:0005655Cellular Componentnucleolar ribonuclease P complexInterproscan
GO:0008033Biological ProcesstRNA processingInterproscan
GO:0006886Biological Processintracellular protein transportInterproscan
GO:0016192Biological Processvesicle-mediated transportInterproscan

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