Gene detail

Detailed information of evm.model.HiC_scaffold_27.208 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:2956187...2985287
NR annotation: XP_031572363.1, protein BZZ1-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_27.208

aTGGATTTTACACCCTGCAAGTCACTGCATAATGAAGACTTGGAGATGACAAGAAACCCATTTGACAGCAAAGATTTTGACAAAGAGAACTGTCCTGCGTTTAGTCCGTCCATTTTTGTAAAATCATCCAGTCAAGGTAGTTCAGAAAAGAAAAACAAAGATTTTAGATGGTCTATTGATCAGATTGCTGTCTTGAAGCCAGCAGATATTGAAGAATATCCTTACCAGGAGTACAGTGTTTCTTATGTCAGAGAAGAAGATGAGATTGCAGCCCAGAATGCAGTAAATGAGTTTACGAAGGAAATTATTTTCCCAAGAAGAAGCCTCATCCCCAAAGAAGAAGCAAGCGCACATGATGACGATAATCTTTGTGTTGAAATTAAAGGTGGCAATAGTACTCCAAAGACACCCAAAACACCACGAACACCTAACTGGATAACATCAAGTCCTTTTCGCGACACAACTCCAAGTAATCGCTTGAGCTCCAATAGTCACGATTCCGTATTTCAATCTTCATTTATTGCTGAGCCCTTCCTTAGTCCTACAGTATCGCCGATCAAAGACAGCAAAGAGACAAATGACAATGAAGCAAATACACTAGAGCTGACAGATGATTCACTCAGCATTTCAATCTCCTCCGTTGAGGACTCCAATGGGAAGGCTAATGATCCCTCGCAGCTGGGAACCAATGTCCCTTCAGAGCAATATCAAACCAATATACGAAGTATTGAGCCGTTTGATTCATTAACCGATGTAAAGGAATCAACGAGGAACTCGCCAATCGAAATACCTGGTGTATCACCGATTAGGCATGATCGAGAGGAAGCCATGGATATATCGGTTGTTAGTTCAACAAGATTATACGGAGCAGTGAATATCTCTGAGCTACCTGATATCAGTCAATCGGTAAAGGAATCGACTGCGAGACATCTACACGGCATGACCGGGTTGTTTTCTCCTATTAGTGGCAGTAGGAAAGTGAGAGAATACAAGAATACTACTGACCTTGGAAAGAGTGTTATCATGGAGAGAAATGACGATGACGATCCTGATGTCAGCTTTGACGATGGAGGACCTTTGGATATAACAGACCTTAGCTCACCcgaacaacaagaagacaagCCATGTGATCAAGACGAAGAAAGCTATCAATCAGATGACGTATTCCAGAATCCTGTTGTCATTGTCTCACCGTTTCCAACACCAAAACGAGGCATCTTGAAGCACAGACCTGCAAAAGAGGACCCCAAGGCCGCTAAAACGGAAGCCTATTTAAACGATAGGTTCCGTAGTTTAGAGCATAAGTTATGCGAAGTTGAAAATCGACTGGAAAGCGTTGAAAGTGCTCGTGAAAAGGAGAAAAAACAGTCTGGAGGAAAAGACGGAATGCCTGCTTGTTCTGTAAGTTCGTCAAATGGTGTTACGTTATCAAAGGAAATGCAACACCAAAAGTATGAAGATAGGAAGTTTGGTGAAGAAGCAACTACAAGAGCACCATTCAAAGACGTTGCCAATAAGCAGGAGATGCATAAAAGTAGATACCATCATCAACCTGAGAAGCGAAACTTCGATATAGATAATGTTGTAATAAGGGCAGACGCTGCTCTTtctaaagcaaagaaaatccAGAGCTCTATTGATGGCGATTTCGAAATAAAGAACGAAATTTTGGCGTTACAGGGAGATAAGTTTAATGAGTACAGAATCGCTGGCATTAGAGACTCATTCAATGACTCAGTGGATGTGCGCTCCAAAACAACCCTGGACACTGGAGAATTCGATAATTCAATATTGCCAGCAGCTCGTAGAGACAGTAGAGTTCCAACTCCTGTAATGAATCTTGCAGGCCTCAGCATTTACACTGCGGCTAAAGAGAACAAAATTCCATATGCTTTGCCAAAACCATTAGAAAGAGAAAGAAGGGGACTAACTGAATTGAGCAAAACTGAGAGGAGGTGTTTAAACCGTGTGGTGAAGCGACTGAGATTGGAGACCTCGGAAAGAAAGATTACAGAGAAACTGAATGACTATAATGGTGACTGGAGTGTGTACACTGTAGtAAGTGAATTCTGTGGAAAACTGGCAGTAATCAAGGAACAAACAGCTGCAAGCCTCCTTGGACTAGTTGAAGTATTTAGAAAGAAAACCAGCGAAGTTAAAAAGAGACCAGATTGTCAAAGTAACTCTTTCCTGGCTGCTTGGGATCAAATTCTtgcagaagttgaaaatgaagcgAAGGATCTTACGGAGCTTGGACATCTCCTTCAAAAGACAGTTGCAGCTCCATTAAACTACAGTGCTACCAGAAAGAAAAGTTTATGCAAAAAGAGTTTCACATACAGAGAAGCTTGTCAATTGCAAATAggaaaaaatgaagatgaacTGCATAAGAAACACAAAGACTACTCTGAGGCATGGTACAAATTCAACACACATGACAAAGAGACTCTCAAGGACCACCATATAGCAGTCTACCACAACAGACATAATGAATTTCTGTTGCAATTGGCCTCCGTTAATAGCATGAATGAAACTCTTTATTTGACAACAGTTCCTGGAATACTAGACGATATAGAAACAGTCCACAAGGATATGAACAAATCATTAGTGAAGTATTTAAAGACATTTCTCTCTATTCAGAAGGATACGtTGAATAAACTTGGAACTCGAATGAACAACGCCGTTGAAGCGGCAAAGAAAATCGACGCGGAAGCAGATTTGCAAAATTTGTCAAATATGTTGATCAAAATGACGTTAGTTACACCAGAGATCCTAGACAAACTGGGACCAATTCCAGAAGAGTACGCGCAGGACATAAGCAAACCAACAACAATTACAATTGGTAGACCAAATGATACAACCATGCTGACAAGCAGAGAAAAACCACATCAATTTGTTGAGCACAATTTCCTAAAGCCTGCTCAGTGTTATTATTGTAGAGGTATCATTGTAGGTCTTGTCAAGCAAGGATTCAAGTGTCAAAACTGTAGAATGAACGTGCATAAGAAATGCAAAACAAATGTACCATTCTGTTCGGGAACACAGCAAAGTAAAAGACCTTCGATTTCGACTCAAGGGGATTTATCTACAGATGAAAGCTTATATGAAGAAATTGAGCCTGAGAGAGCCAGTCCACCTGAAAGGAGAACGACAAAACAGCCACCGTCCAATAGAAACAGTGAAGAAATCGACCAAAATTATGaGTTCCCTCAGCCTGTTAGATTGCCTGGCCCGTTACCAACTGGTGCACTTCCATCGAAGGATAGCATTGTCAATAAACCATTGCCAAATGTGCCTCAGGAGCTGCTTTGGGTAGTTTCTctgtttgattttgatggcgaaGAGAGTAATGATCTCCAAGTCTCAGCTGGTGATAAGATCCAAGTTCTCGGAAAATCTAGTGATGAATGGTGGGAGGGAGTTTGCCGTGGAAAGAAAGGATATTTTCCTGCATCGTACGTTGAGACAATACAAGAAAATGATATGATCCTCAGATGTTTATATGGATTCGACGCTGATCCAGAAAGTGATGAACTGTCATTAGAAGAAGGAGAGATTCTTGTGCTTGTTGAAGATGAAGGCAATGGTTGGACTGTTGGCAAAGCAAAGGGAAAACAGGAGCTTTTCCATCAAGCTACGTTGAAAAACTTTAATGATACTAATTTCATATTACTAATTTCGTATGAAGATAGAATATAA

Transcript

evm.model.HiC_scaffold_27.208

Protein

Uniprot

Gene family

Uniprot term	Description
Q8R1B0	SH3 and cysteine-rich domain-containing protein 2 OS=Mus musculus OX=10090 GN=Stac2 PE=1 SV=1
P97306	SH3 and cysteine-rich domain-containing protein OS=Mus musculus OX=10090 GN=Stac PE=1 SV=1
Q6ZMT1	SH3 and cysteine-rich domain-containing protein 2 OS=Homo sapiens OX=9606 GN=STAC2 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|SH3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan
PF15280	BORA_N	Protein aurora borealis N-terminus	Family	Interproscan
PF00018	SH3_1	SH3 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan
IPR027267	Homologous_superfamily	AH/BAR domain superfamily	Interproscan
IPR001452	Domain	SH3 domain	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR039688	Family	STAC1/2/3	Interproscan
IPR023252	Family	Aurora borealis protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR15135	STAC	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003009	Biological Process	skeletal muscle contraction	Interproscan
GO:0031234	Cellular Component	extrinsic component of cytoplasmic side of plasma membrane	Interproscan
GO:1901387	Biological Process	positive regulation of voltage-gated calcium channel activity	Interproscan
GO:1903078	Biological Process	positive regulation of protein localization to plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K23712	STAC2; SH3 and cysteine-rich domain-containing protein 2	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala