Gene detail

Detailed information of evm.model.HiC_scaffold_27.224 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:3111965...3128658
NR annotation: KAJ7386981.1, NEDD8-activating enzyme E1 regulatory subunit [Desmophyllum pertusum]

Gene Structure

More details in Jbrowse

Sequence

CDS

evm.model.HiC_scaffold_27.224

ATGAAAAGGAAGGAAGCTGAAGAAGGACCCCGGATTCAGTCAGTAACAAAAATGTCGAAATCAGCAGAGAATAAGAATTCAAGTGTTAACAAAAATCAGAAATACGACAGACAGTTGAGGCTTTGGGGTGATCATGGCCAGAAGGAGCTTGAAAATGCAAAAGTTTGTCTGGTAAATGGAACAGCTGTTGGAGTCGAAACACTAAAGAGCTTAGTTTTACCAGGAATTGGAAAATTTGTCATTGTTGATAATGAGAATGTCAAGGAGGAAGATTTGGGTAACAATTTCTTCTTGGATCAAGAGAGTCTTGGAATGCCAAGAGCACATTGCACATGCAAGCTGTTGCAAGAACTTAATACAGATGTTGATGGAAGCTGTTTTGTACAGGATCCAAGTGAACTTGTGGAGAATGATCCAGagttttacaaacaatttaCAATTGTAATTGCATCTGATGTAAAAGAAAGCGTACTGATCAAACTTTCCGATCTGTTATGGCGTGCTAACATTCCTCTTCTTGTGTGCGGTTCTGTTGGATTCATTGGATTCATCCGATTGGTTGTTAAAGAGCATGCAGTTGTTGAAGCTCATCCAGATAACAGTCATGATGATTTAAGACTCGATAGGCCATTTCCAGGTCTCACAGAATATATGGACAATATGGATTTGAACAACATGAGCAAACAGGATCATGGTCACACTCCTTATTTAGTGATAATATACaagtttcttgaaaaatggaaaCAAGAGCATGATGGTAATCCACCAAAAACCTTTAAGGAAAAGAAGGAGTTCAAGCAAATGATAGCGGGAGGGATCTTGAAAAACGAGCATGGCGTTGAAGAAGTGGAAGAAAATTTCGAAGAAGCAATCAAGAATGTTAACAATGTACTTGTCCCAACGAAGGTTCCAAGTAATGTTCAAGAGATTTTCAATTCACACCGTTGTGAGCATCCATCAGAACCGAACATGAACTTTTGGATAATTGCCAGAGCAGCGAAAGAATTCTTGAACGTCACAGGCTGTTTACCATTGAGAGGATCTATACCAGATATGTTCTCGGATTCAGCACGATATATCCAACTACAAACTATTTACAAGAATCAAGCCTCAAATGACATAGCAAGCGTTTCAGAAATAGTAAGGCAATGTCTTATTGATATGCAATTGGAAGAAGATCTTATTTCGGAAGAAGAAATAAAGACATTCTcGGACTTCATTGGTGATGACGAAGATTCGCCTGGAATGCTCTATCTGCTCATAAGAGGAGTGAATGCatttaatgaaatgaagaaacgATTGCCAGGAACTGTTGACAACGAACTAGAAGATGATTATGTTCAGCTGAAGGAGATACTCAAAGATATTGGAATATCTCTTCACGTTCAAGTTGATGTCAAGGATGAACTTATTAAAGAAATGTGTCGCTGTGGAGCTTCTGAATTGCATACTGTGGCAGCCATTATTGGAGGCATAGCAGCACAAGAGGCAATCAAAGTCATAACTCGTCAGTTTGTTCCTATTACAAACACTTTCATTTACAATGCAATGACTGAAACATCGAACATGAACTTTTGGATAATTGCCAGAGCAGCGAAAGAATTCTTGAACGTCACAGGCTGTTTACCATTGAGAGGATCTATACCAGATATGTTCTCGGATTCAGCACGATATATCCAACTACAAACTATTTACAAGAATCAAGCCTCAAATGACATAGCAAGCGTTTCAGAAATAGTAAGGCAATGTCTTATTGATATGCAATTGGAAGAAGATCTTATTTCGGAAGAAGAAATAAAGACATTCTGTAAAAATGTGCATTTCTTAAATGTTATTCACGGGCACCCTCTTGGAAATGAATTACGTAACCACAGTGAAGGAAACTCTCATGCGATTGcGGACTTCATTGGTGATGACGAAGATTCGCCTGGAATGCTCTATCTGCTCATAAGAGGAGTGAATGCatttaatgaaatgaagaaacgATTGCCAGGAACTGTTGACAACGAACTAGAAGATGATTATGTTCAGCTGAAGGAGATACTCAAAGATATTGGAATATCTCTTCACGTTCAAGTTGATGTCAAGGATGAACTTATTAAAGAAATGTAA

Transcript

evm.model.HiC_scaffold_27.224

Protein

Uniprot

Gene family

Uniprot term	Description
Q6NTW6	NEDD8-activating enzyme E1 regulatory subunit OS=Xenopus laevis OX=8355 GN=nae1 PE=2 SV=1
Q7SXP2	NEDD8-activating enzyme E1 regulatory subunit OS=Danio rerio OX=7955 GN=nae1 PE=2 SV=2
Q13564	NEDD8-activating enzyme E1 regulatory subunit OS=Homo sapiens OX=9606 GN=NAE1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	E1\|ThiF\|ThiF

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00899	ThiF	ThiF family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR035985	Homologous_superfamily	Ubiquitin-activating enzyme	Interproscan
IPR000594	Domain	THIF-type NAD/FAD binding fold	Interproscan
IPR045886	Family	ThiF/MoeB/HesA family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10953	UBIQUITIN-ACTIVATING ENZYME E1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008641	Molecular Function	ubiquitin-like modifier activating enzyme activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0019781	Molecular Function	NEDD8 activating enzyme activity	Interproscan
GO:0032446	Biological Process	protein modification by small protein conjugation	Interproscan
GO:0045116	Biological Process	protein neddylation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04532	NAE1, APPBP1; NEDD8-activating enzyme E1 regulatory subunit	-	Ubiquitin system	ko04121	deepkoala