Detailed information of evm.model.HiC_scaffold_27.301 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:4069360...4116576
NR annotation: XP_047124880.1, epidermal growth factor receptor kinase substrate 8-like isoform X5 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
P54131Neuronal acetylcholine receptor subunit alpha-7 OS=Bos taurus OX=9913 GN=CHRNA7 PE=1 SV=1
P36544Neuronal acetylcholine receptor subunit alpha-7 OS=Homo sapiens OX=9606 GN=CHRNA7 PE=1 SV=5
P49582Neuronal acetylcholine receptor subunit alpha-7 OS=Mus musculus OX=10090 GN=Chrna7 PE=1 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|SH3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18016SAM_3SAM domain (Sterile alpha motif)DomainInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF00018SH3_1SH3 domainDomainInterproscan
PF08416PTBPhosphotyrosine-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR041418DomainSAM domainInterproscan
IPR039801FamilyEpidermal growth factor receptor kinase substrate 8-likeInterproscan
IPR001452DomainSH3 domainInterproscan
IPR036028Homologous_superfamilySH3-like domain superfamilyInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR013761Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013625DomainTensin/EPS8 phosphotyrosine-binding domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12287EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0003779Molecular Functionactin bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0007266Biological ProcessRho protein signal transductionInterproscan
GO:0035023Biological Processregulation of Rho protein signal transductionInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan

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