Detailed information of evm.model.HiC_scaffold_27.384 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:5007367...5031194
NR annotation: CAH3020389.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6TH47STAM-binding protein-like A OS=Danio rerio OX=7955 GN=stambpa PE=2 SV=3
Q9CQ26STAM-binding protein OS=Mus musculus OX=10090 GN=Stambp PE=1 SV=1
Q8R424STAM-binding protein OS=Rattus norvegicus OX=10116 GN=Stambp PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Jab_MPN

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08969USP8_dimerUSP8 dimerisation domainDomainInterproscan
PF01398JABJAB1/Mov34/MPN/PAD-1 ubiquitin proteaseFamilyInterproscan
PF00226DnaJDnaJ domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036869Homologous_superfamilyChaperone J-domain superfamilyInterproscan
IPR044098DomainSTAMBP/STALP-like, MPN domainInterproscan
IPR001623DomainDnaJ domainInterproscan
IPR015063DomainUSP8 dimerisation domainInterproscan
IPR000555DomainJAB1/MPN/MOV34 metalloenzyme domainInterproscan
IPR018253Conserved_siteDnaJ domain, conserved siteInterproscan
IPR037518DomainMPN domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12947AMSH-LIKE PROTEASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016579Biological Processprotein deubiquitinationInterproscan
GO:0061578Molecular FunctionK63-linked deubiquitinase activityInterproscan
GO:0070536Biological Processprotein K63-linked deubiquitinationInterproscan
GO:0140492Molecular Functionmetal-dependent deubiquitinase activityInterproscan
GO:0005768Cellular ComponentendosomeInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008233Molecular Functionpeptidase activityInterproscan
GO:0008237Molecular Functionmetallopeptidase activityInterproscan

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