Gene detail

Detailed information of evm.model.HiC_scaffold_27.399 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:5270781...5277225
NR annotation: XP_027036832.1, RNA exonuclease 4-like, partial [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q6DEW6	RNA exonuclease 4 OS=Xenopus tropicalis OX=8364 GN=rexo4 PE=2 SV=1
Q4PER6	RNA exonuclease 4 OS=Mycosarcoma maydis OX=5270 GN=REX4 PE=3 SV=1
Q91560	RNA exonuclease 4 OS=Xenopus laevis OX=8355 GN=rexo4 PE=2 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00929	RNase_T	Exonuclease	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037431	Domain	RNA exonuclease 4, DEDDh 3'-5' exonuclease domain	Interproscan
IPR013520	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR047021	Family	RNA exonuclease REXO1/REXO3/REXO4-like	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12801	RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006364	Biological Process	rRNA processing	Interproscan
GO:0008408	Molecular Function	3'-5' exonuclease activity	Interproscan
GO:0004527	Molecular Function	exonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18327	REXO4, REX4; RNA exonuclease 4	EC:3.1.-.-	Ribosome biogenesis	ko03009	deepkoala