Detailed information of evm.model.HiC_scaffold_27.78 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:1088702...1133099
NR annotation: XP_022783530.1, neurogenic locus notch homolog protein 1-like isoform X2 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P81069GA-binding protein subunit beta-2 OS=Mus musculus OX=10090 GN=Gabpb2 PE=1 SV=2
Q0V8G2GA-binding protein subunit beta-2 OS=Bos taurus OX=9913 GN=GABPB2 PE=2 SV=2
Q8TAK5GA-binding protein subunit beta-2 OS=Homo sapiens OX=9606 GN=GABPB2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00023AnkAnkyrin repeatRepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02100ODC_AZOrnithine decarboxylase antizymeFamilyInterproscan
PF07528DZF_NDZF N-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002110RepeatAnkyrin repeatInterproscan
IPR038581Homologous_superfamilyOrnithine decarboxylase antizyme superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR002993FamilyOrnithine decarboxylase antizymeInterproscan
IPR016181Homologous_superfamilyAcyl-CoA N-acyltransferaseInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan
IPR049401DomainDZF domain, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24193ANKYRIN REPEAT PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008073Molecular Functionornithine decarboxylase inhibitor activityInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

TOP