Detailed information of evm.model.HiC_scaffold_27.89 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_27:1231699...1256191
NR annotation: XP_047132382.1, neogenin [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P97798Neogenin OS=Mus musculus OX=10090 GN=Neo1 PE=1 SV=2
Q7ZW34Contactin-5 OS=Danio rerio OX=7955 GN=cntn5 PE=2 SV=1
Q8WZ42Titin OS=Homo sapiens OX=9606 GN=TTN PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13927Ig_3Immunoglobulin domainDomainInterproscan
PF00035dsrmDouble-stranded RNA binding motifDomainInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961DomainFibronectin type IIIInterproscan
IPR014720DomainDouble-stranded RNA-binding domainInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR44170PROTEIN SIDEKICKInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0098609Biological Processcell-cell adhesionInterproscan

TOP