Gene detail

Detailed information of evm.model.HiC_scaffold_275.4 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_275:22781...25085
NR annotation: XP_047137146.1, flap endonuclease 1-like [Hydra vulgaris]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
A7RRJ0	Flap endonuclease 1 OS=Nematostella vectensis OX=45351 GN=FEN1 PE=3 SV=1
B3RVF0	Flap endonuclease 1 OS=Trichoplax adhaerens OX=10228 GN=FEN1 PE=3 SV=1
P70040	Flap endonuclease 1-A OS=Xenopus laevis OX=8355 GN=fen1-a PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00752	XPG_N	XPG N-terminal domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006084	Family	XPG/Rad2 endonuclease	Interproscan
IPR006085	Domain	XPG, N-terminal	Interproscan
IPR029060	Homologous_superfamily	PIN-like domain superfamily	Interproscan
IPR019974	Conserved_site	XPG conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11081	FLAP ENDONUCLEASE FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0004523	Molecular Function	RNA-DNA hybrid ribonuclease activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0008409	Molecular Function	5'-3' exonuclease activity	Interproscan
GO:0017108	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0030145	Molecular Function	manganese ion binding	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan
GO:0016788	Molecular Function	hydrolase activity, acting on ester bonds	Interproscan