Detailed information of evm.model.HiC_scaffold_28.102 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_28:1290049...1294811
NR annotation: VDI25606.1, poly(A)-specific ribonuclease [Mytilus galloprovincialis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZU92Poly(A)-specific ribonuclease PARN OS=Danio rerio OX=7955 GN=parn PE=1 SV=2
Q90ZA1Poly(A)-specific ribonuclease PARN OS=Xenopus laevis OX=8355 GN=parn PE=1 SV=1
P69341Poly(A)-specific ribonuclease PARN OS=Bos taurus OX=9913 GN=PARN PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04857CAF1CAF1 family ribonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006941FamilyRibonuclease CAF1Interproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR051181FamilyCAF1 family poly(A)-specific ribonucleasesInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15092POLY A -SPECIFIC RIBONUCLEASE/TARGET OF EGR1, MEMBER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

TOP