Detailed information of evm.model.HiC_scaffold_28.230 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_28:2883087...2971054
NR annotation: XP_047143727.1, uncharacterized protein LOC100197078 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BL48RING finger protein unkempt homolog OS=Mus musculus OX=10090 GN=Unk PE=1 SV=1
Q9C0B0RING finger protein unkempt homolog OS=Homo sapiens OX=9606 GN=UNK PE=1 SV=2
Q5RF24WD repeat-containing protein 13 OS=Pongo abelii OX=9601 GN=WDR13 PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyUBD|Other|Beta-prp
Ubiquitin FamilyE3|E3 adaptor Cullin RING|CDC20
Ubiquitin FamilyE3|E3 adaptor Cullin RING|DWD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01477PLATPLAT/LH2 domainDomainInterproscan
PF20519Polycystin_domPolycystin domainDomainInterproscan
PF08016PKD_channelPolycystin cation channelFamilyInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF02010REJREJ domainFamilyInterproscan
PF00400WD40WD domain, G-beta repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000571DomainZinc finger, CCCH-typeInterproscan
IPR003915FamilyPolycystic kidney disease type 2 proteinInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR051223FamilyPolycystinInterproscan
IPR001680RepeatWD40 repeatInterproscan
IPR015943Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001024DomainPLAT/LH2 domainInterproscan
IPR046791DomainPolycystin domainInterproscan
IPR013122DomainPolycystin cation channel, PKD1/PKD2Interproscan
IPR036392Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR036855Homologous_superfamilyZinc finger, CCCH-type superfamilyInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR035986Homologous_superfamilyPKD domain superfamilyInterproscan
IPR002859DomainPKD/REJ-like domainInterproscan
IPR036322Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR046338Homologous_superfamilyGAIN domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10877POLYCYSTIN FAMILY MEMBERInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046872Molecular Functionmetal ion bindingInterproscan
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0050982Biological Processdetection of mechanical stimulusInterproscan

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