Gene detail

Detailed information of evm.model.HiC_scaffold_28.59 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_28:722798...732877
NR annotation: XP_020894902.1, E3 ubiquitin-protein ligase RNF216 [Exaiptasia diaphana]

Gene Structure

Sequence

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|RBR

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
--	--	--	--	--

InterPro

InterPro term	Type	Description	Source
IPR047546	Domain	E3 ubiquitin-protein ligase RNF216, Rcat domain	Interproscan
IPR051628	Family	Linear Ubiquitination-Associated E3 Ligases	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR047544	Domain	E3 ubiquitin-protein ligase RNF216, RING finger, HC subclass	Interproscan
IPR044066	Domain	TRIAD supradomain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22770	UBIQUITIN CONJUGATING ENZYME 7 INTERACTING PROTEIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000151	Cellular Component	ubiquitin ligase complex	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0043130	Molecular Function	ubiquitin binding	Interproscan
GO:0043161	Biological Process	proteasome-mediated ubiquitin-dependent protein catabolic process	Interproscan
GO:0071797	Cellular Component	LUBAC complex	Interproscan
GO:0097039	Biological Process	protein linear polyubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11976	RNF216, TRIAD3; E3 ubiquitin-protein ligase RNF216	EC:2.3.2.31	Ubiquitin system	ko04121	deepkoala