Detailed information of evm.model.HiC_scaffold_28.78 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_28:976719...1025275
NR annotation: XP_020899708.1, glutamate receptor ionotropic, kainate 2 isoform X2 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q13002Glutamate receptor ionotropic, kainate 2 OS=Homo sapiens OX=9606 GN=GRIK2 PE=1 SV=1
P23819Glutamate receptor 2 OS=Mus musculus OX=10090 GN=Gria2 PE=1 SV=3
P19491Glutamate receptor 2 OS=Rattus norvegicus OX=10116 GN=Gria2 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01094ANF_receptorReceptor family ligand binding regionFamilyInterproscan
PF000037tm_37 transmembrane sweet-taste receptor of 3 GCPRDomainInterproscan
PF00060Lig_chanLigand-gated ion channelFamilyInterproscan
PF10613Lig_chan-Glu_bdLigated ion channel L-glutamate- and glycine-binding siteDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015683FamilyIonotropic glutamate receptorInterproscan
IPR001828DomainReceptor, ligand binding regionInterproscan
IPR017978DomainGPCR family 3, C-terminalInterproscan
IPR019594DomainIonotropic glutamate receptor, L-glutamate and glycine-binding domainInterproscan
IPR001320DomainIonotropic glutamate receptor, C-terminalInterproscan
IPR028082Homologous_superfamilyPeriplasmic binding protein-like IInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18966IONOTROPIC GLUTAMATE RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0015276Molecular Functionligand-gated monoatomic ion channel activityInterproscan
GO:0038023Molecular Functionsignaling receptor activityInterproscan
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan

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