Gene detail

Detailed information of evm.model.HiC_scaffold_29.1173 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:8637265...8645856
NR annotation: XP_027046815.1, protein ZGRF1-like [Pocillopora damicornis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q86YA3	5'-3' DNA helicase ZGRF1 OS=Homo sapiens OX=9606 GN=ZGRF1 PE=1 SV=3
Q0VGT4	5'-3' DNA helicase ZGRF1 OS=Mus musculus OX=10090 GN=Zgrf1 PE=1 SV=2
Q9VYS3	Regulator of nonsense transcripts 1 homolog OS=Drosophila melanogaster OX=7227 GN=Upf1 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13087	AAA_12	AAA domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR041679	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR047187	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR045055	Family	DNA2/NAM7-like helicase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000184	Biological Process	nuclear-transcribed mRNA catabolic process, nonsense-mediated decay	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan