Detailed information of evm.model.HiC_scaffold_29.1223 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:9149492...9197120
NR annotation: CAH3019480.1, unnamed protein product [Porites evermanni]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O35604NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=1 SV=2
P56941NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 SV=1
O15118NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03737RraA-likeAldolase/RraAFamilyInterproscan
PF02460PatchedPatched familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010203FamilyRegulator of ribonuclease activity AInterproscan
IPR005493FamilyRibonuclease E inhibitor RraA/RraA-like proteinInterproscan
IPR000731DomainSterol-sensing domainInterproscan
IPR036704Homologous_superfamilyRibonuclease E inhibitor RraA/RraA-like superfamilyInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008428Molecular Functionribonuclease inhibitor activityInterproscan
GO:0051252Biological Processregulation of RNA metabolic processInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K12385NPC1; Niemann-Pick C1 protein-Transportersko02000deepkoala

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