Detailed information of evm.model.HiC_scaffold_29.1236 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:9326122...9343924
NR annotation: XP_047145280.1, NPC intracellular cholesterol transporter 1 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P56941NPC intracellular cholesterol transporter 1 OS=Sus scrofa OX=9823 GN=NPC1 PE=2 SV=1
O35604NPC intracellular cholesterol transporter 1 OS=Mus musculus OX=10090 GN=Npc1 PE=1 SV=2
O15118NPC intracellular cholesterol transporter 1 OS=Homo sapiens OX=9606 GN=NPC1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF16414NPC1_NNiemann-Pick C1 N terminusDomainInterproscan
PF02460PatchedPatched familyFamilyInterproscan
PF03737RraA-likeAldolase/RraAFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR010203FamilyRegulator of ribonuclease activity AInterproscan
IPR036704Homologous_superfamilyRibonuclease E inhibitor RraA/RraA-like superfamilyInterproscan
IPR005493FamilyRibonuclease E inhibitor RraA/RraA-like proteinInterproscan
IPR004765FamilyNPC1-likeInterproscan
IPR032190DomainNiemann-Pick C1, N-terminalInterproscan
IPR003392FamilyProtein patched/dispatchedInterproscan
IPR000731DomainSterol-sensing domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45727NPC INTRACELLULAR CHOLESTEROL TRANSPORTER 1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0008428Molecular Functionribonuclease inhibitor activityInterproscan
GO:0051252Biological Processregulation of RNA metabolic processInterproscan
GO:0005319Molecular Functionlipid transporter activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0015918Biological Processsterol transportInterproscan
GO:0032934Molecular Functionsterol bindingInterproscan

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