Gene detail

Detailed information of evm.model.HiC_scaffold_29.1320 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:10237563...10258856
NR annotation: XP_780532.5, crossover junction endonuclease MUS81 [Strongylocentrotus purpuratus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q640B4	Structure-specific endonuclease subunit MUS81 OS=Xenopus tropicalis OX=8364 GN=mus81 PE=2 SV=1
Q7SXA9	Structure-specific endonuclease subunit MUS81 OS=Danio rerio OX=7955 GN=mus81 PE=1 SV=1
Q4KM32	Structure-specific endonuclease subunit MUS81 OS=Rattus norvegicus OX=10116 GN=Mus81 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21136	MUS81-like_WH	Crossover junction endonuclease MUS81-like, winged helix domain	Domain	Interproscan
PF02732	ERCC4	ERCC4 domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR011335	Homologous_superfamily	Restriction endonuclease type II-like	Interproscan
IPR047417	Domain	MUS81, winged helix domain	Interproscan
IPR033309	Family	Crossover junction endonuclease Mus81	Interproscan
IPR047416	Domain	MUS81, XPF-like nuclease domain	Interproscan
IPR006166	Domain	ERCC4 domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13451	CLASS II CROSSOVER JUNCTION ENDONUCLEASE MUS81	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000712	Biological Process	resolution of meiotic recombination intermediates	Interproscan
GO:0000727	Biological Process	double-strand break repair via break-induced replication	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006302	Biological Process	double-strand break repair	Interproscan
GO:0006308	Biological Process	DNA catabolic process	Interproscan
GO:0008821	Molecular Function	crossover junction DNA endonuclease activity	Interproscan
GO:0031573	Biological Process	mitotic intra-S DNA damage checkpoint signaling	Interproscan
GO:0048257	Molecular Function	3'-flap endonuclease activity	Interproscan
GO:0048476	Cellular Component	Holliday junction resolvase complex	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0004518	Molecular Function	nuclease activity	Interproscan