Detailed information of evm.model.HiC_scaffold_29.1732 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:14620998...14627655
NR annotation: XP_047126676.1, high mobility group B protein 3 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q4PBZ9Non-histone chromosomal protein 6 OS=Mycosarcoma maydis OX=5270 GN=NHP6 PE=3 SV=2
O64702High mobility group B protein 14 OS=Arabidopsis thaliana OX=3702 GN=HMGB14 PE=2 SV=2
P0CO25Non-histone chromosomal protein 6 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=NHP6 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHMG

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00505HMG_boxHMG (high mobility group) boxDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009071DomainHigh mobility group box domainInterproscan
IPR050342FamilyHigh Mobility Group Box (HMGB)Interproscan
IPR036910Homologous_superfamilyHigh mobility group box domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48112HIGH MOBILITY GROUP PROTEIN DSP1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0008301Molecular FunctionDNA binding, bendingInterproscan

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