Detailed information of evm.model.HiC_scaffold_29.1784 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:15107630...15178276
NR annotation: XP_047126139.1, inositol 1,4,5-trisphosphate receptor type 1 isoform X2 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q14643Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 OS=Homo sapiens OX=9606 GN=ITPR1 PE=1 SV=3
P11881Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 OS=Mus musculus OX=10090 GN=Itpr1 PE=1 SV=2
P29994Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1 OS=Rattus norvegicus OX=10116 GN=Itpr1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01365RYDR_ITPRRIH domainRepeatInterproscan
PF08454RIH_assocRyR and IP3R Homology associatedRepeatInterproscan
PF00520Ion_transIon transport proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000699DomainRIH domainInterproscan
IPR013662DomainRyR/IP3R Homology associated domainInterproscan
IPR015925FamilyRyanodine/Inositol 1,4,5-trisphosphate receptorInterproscan
IPR035910Homologous_superfamilyRyR/IP3 receptor binding core, RIH domain superfamilyInterproscan
IPR005821DomainIon transport domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45816MIR DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005262Molecular Functioncalcium channel activityInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0070588Biological Processcalcium ion transmembrane transportInterproscan
GO:0006816Biological Processcalcium ion transportInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K04838SCN5A, NAV1.5; voltage-gated sodium channel type V alpha-Ion channelsko04040deepkoala

TOP