Detailed information of evm.model.HiC_scaffold_29.971 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_29:6245550...6247503
NR annotation: XP_033106069.1, uncharacterized protein LOC117108217 [Anneissia japonica]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
A0A345BJN8MFS-type transporter clz9 OS=Cochliobolus lunatus OX=5503 GN=clz9 PE=3 SV=1
Gene familySubfamily
Transcription Factors FamilyHTH

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03221HTH_Tnp_Tc5Tc5 transposase DNA-binding domainDomainInterproscan
PF05225HTH_psqhelix-turn-helix, Psq domainDomainInterproscan
PF03184DDE_1DDE superfamily endonucleaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006600DomainHTH CenpB-type DNA-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR050863FamilyCentromere and Transposable Element-Derived ProteinInterproscan
IPR007889DomainDNA binding HTH domain, Psq-typeInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR004875DomainDDE superfamily endonuclease domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19303TRANSPOSONInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan

TOP