Detailed information of evm.model.HiC_scaffold_293.33 in Chrysaora quinquecirrha

Genomic Location: HiC_scaffold_293:250893...274702
NR annotation: XP_047138178.1, msx2-interacting protein [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q96T58Msx2-interacting protein OS=Homo sapiens OX=9606 GN=SPEN PE=1 SV=1
Q62504Msx2-interacting protein OS=Mus musculus OX=10090 GN=Spen PE=1 SV=2
Q8SX83Protein split ends OS=Drosophila melanogaster OX=7227 GN=spen PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07690MFS_1Major Facilitator SuperfamilyFamilyInterproscan
PF07744SPOCSPOC domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR011701FamilyMajor facilitator superfamilyInterproscan
IPR036259Homologous_superfamilyMFS transporter superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR016194Homologous_superfamilySPOC-like, C-terminal domain superfamilyInterproscan
IPR012921DomainSpen paralogue and orthologue SPOC, C-terminalInterproscan
IPR010912DomainSpen paralogue/orthologue C-terminal, metazoaInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23189RNA RECOGNITION MOTIF-CONTAININGInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0022857Molecular Functiontransmembrane transporter activityInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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